Ph.D. student working in the Lagergren Lab at KTH, Stockholm.
email: okviman@kth.se
Research interests
Probabilistic machine learning: My recent and current works involve, e.g., variational inference, variational auto-encoders, importance sampling, sequential Monte Carlo methods and Monte Carlo objective functions.
Bayesian phylogenetics: I research variational inference-based phylogenetics, tree sampling methods and joint inference of gene and species trees.
Articles
- Indirectly Parameterized Concrete Autoencoders, arxiv (with Alfred Nilsson, Klas Wijk, Sai Bharath Chandra Gutha, Erik Englesson, Alexandra Hotti, Carlo Saccardi, Jens Lagergren, Ricardo Vinuesa and Hossein Azizpour)
- Variational Resampling, AISTATS 2024 (with Nicola Branchini, Víctor Elvira and Jens Lagergren)
- Improved Variational Bayesian Phylogenetic Inference using Mixtures, arxiv (with Ricky Molén and Jens Lagergren)
- Cooperation in the Latent Space: The Benefits of Adding Mixture Components in Variational Autoencoders, ICML 2023 (with Ricky Molén, Alexandra Hotti, Semih Kurt, Víctor Elvira and Jens Lagergren)
- VaiPhy: a Variational Inference Based Algorithm for Phylogeny, [Oral] NeurIPS 2022 (with Hazal Koptagel, Harald Melin, Negar Safinianaini and Jens Lagergren)
- Multiple Importance Sampling ELBO and Deep Ensembles of Variational Approximations, AISTATS 2022 (with Harald Melin, Hazal Koptagel, Víctor Elvira and Jens Lagergren) [5-min presentation]
- Statistical Distance Based Deterministic Offspring Selection in SMC Methods, arxiv (with Hazal Koptagel, Harald Melin and Jens Lagergren)
- KL/TV Reshuffling: Statistical Distance Based Offspring Selection in SMC Methods, Master Thesis 2020
- [Re] Tensor Monte Carlo: Particle Methods for the GPU Era, NeurIPS 2019 Reproducibility Challenge/ReScience-C Journal Publication (with Linus Nilsson and Martin Larsson)
- Sequence Disambiguation with Synaptic Traces in Associative Neural Networks, ICANN 2019 (with Ramon H. Martinez, Anders Lansner and Pawel Herman)